An Early Stage Researcher's Primer on Systems Medicine Terminology

Zanin, Massimiliano; Aitya, Nadim A.A.; Basilio, José; Baumbach, Jan; Benis, Arriel; Behera, Chandan K.; Bucholc, Magda; Castiglione, Filippo; Chouvarda, Ioanna; Comte, Blandine; Dao, Tien-Tuan; Ding, Xuemei; Pujos-Guillot, Estelle; Filipovic, Nenad; Finn, David P.; Glass, David H.; Harel, Nissim; Iesmantas, Tomas; Ivanoska, Ilinka; Joshi, Alok; Boudjeltia, Karim Zouaoui; Kaoui, Badr; Kaur, Daman; Maguire, Liam P.; McClean, Paula L.; McCombe, Niamh; de, João Luís; Moisescu, Mihnea Alexandru; Pappalardo, Francesco; Polster, Annikka; Prasad, Girijesh; Rozman, Damjana; Sacala, Ioan; Sanchez-Bornot, Jose M.; Schmid, Johannes A.; Sharp, Trevor; Solé-Casals, Jordi; Spiwok, Vojtěch; Spyrou, George M.; Stalidzans, Egils; Stres, Blaž; Sustersic, Tijana; Symeonidis, Ioannis; Tieri, Paolo; Todd, Stephen; Steen, Kristel Van; Veneva, Milena; Wang, Da-Hui; Wang, Haiying; Wang, Hui; Watterson, Steven; Wong-Lin, KongFatt; Yang, Scott; Zou, Xin; Schmidt, Harald H.H.W.

doi:10.1089/nsm.2020.0003

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An Early Stage Researcher's Primer on Systems Medicine Terminology

Massimiliano Zanin, Nadim A.A. Aitya, José Basilio, Jan Baumbach, Arriel Benis, Chandan K. Behera, Magda Bucholc, Filippo Castiglione, Ioanna Chouvarda, Blandine Comte, Tien-Tuan Dao, Xuemei Ding, Estelle Pujos-Guillot, Nenad Filipovic, David P. Finn, David H. Glass, Nissim Harel, Tomas Iesmantas, Ilinka Ivanoska, Alok Joshi, Karim Zouaoui Boudjeltia, Badr Kaoui, Daman Kaur, Liam P. Maguire, Paula L. McClean, Niamh McCombe, João Luís de Miranda, Mihnea Alexandru Moisescu, Francesco Pappalardo, Annikka Polster, Girijesh Prasad, Damjana Rozman, Ioan Sacala, Jose M. Sanchez-Bornot, Johannes A. Schmid, Trevor Sharp, Jordi Solé-Casals, Vojtěch Spiwok, George M. Spyrou, Egils Stalidzans, Blaž Stres, Tijana Sustersic, Ioannis Symeonidis, Paolo Tieri, Stephen Todd, Kristel Van Steen, Milena Veneva, Da-Hui Wang, Haiying Wang, Hui Wang, Steven Watterson, KongFatt Wong-Lin, Scott Yang

, Xin Zou, Harald H.H.W. Schmidt

Network and Systems Medicine, Volume: 4, Issue: 1, Pages: 2 - 50

Swansea University Author: Scott Yang

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DOI (Published version): 10.1089/nsm.2020.0003

Abstract

Background: Systems Medicine is a novel approach to medicine, that is, an interdisciplinary field that considers the human body as a system, composed of multiple parts and of complex relationships at multiple levels, and further integrated into an environment. Exploring Systems Medicine implies unde...

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Published in:	Network and Systems Medicine
ISSN:	2690-5949
Published:	Mary Ann Liebert Inc 2021
Online Access:	Check full text
URI:	https://cronfa.swan.ac.uk/Record/cronfa58942
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first_indexed	2021-12-07T09:52:35Z
last_indexed	2021-12-31T04:28:59Z
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Exploring Systems Medicine implies understanding and combining concepts coming from diametral different fields, including medicine, biology, statistics, modeling and simulation, and data science. Such heterogeneity leads to semantic issues, which may slow down implementation and fruitful interaction between these highly diverse fields.Methods: In this review, we collect and explain more than100 terms related to Systems Medicine. These include both modeling and data science terms and basic systems medicine terms, along with some synthetic definitions, examples of applications, and lists of relevant references.Results: This glossary aims at being a first aid kit for the Systems Medicine researcher facing an unfamiliar term, where he/she can get a first understanding of them, and, more importantly, examples and references for digging into the topic.</abstract><type>Journal Article</type><journal>Network and Systems Medicine</journal><volume>4</volume><journalNumber>1</journalNumber><paginationStart>2</paginationStart><paginationEnd>50</paginationEnd><publisher>Mary Ann Liebert Inc</publisher><placeOfPublication/><isbnPrint/><isbnElectronic/><issnPrint/><issnElectronic>2690-5949</issnElectronic><keywords>systems medicine; multiscale modeling; multiscale data science</keywords><publishedDay>1</publishedDay><publishedMonth>2</publishedMonth><publishedYear>2021</publishedYear><publishedDate>2021-02-01</publishedDate><doi>10.1089/nsm.2020.0003</doi><url/><notes/><college>COLLEGE NANME</college><department>Computer Science</department><CollegeCode>COLLEGE CODE</CollegeCode><DepartmentCode>SCS</DepartmentCode><institution>Swansea University</institution><apcterm/><lastEdited>2021-12-30T14:04:08.6667459</lastEdited><Created>2021-12-07T09:52:12.1164689</Created><path><level id="1">Faculty of Science and Engineering</level><level id="2">School of Mathematics and Computer Science - Computer Science</level></path><authors><author><firstname>Massimiliano</firstname><surname>Zanin</surname><order>1</order></author><author><firstname>Nadim A.A.</firstname><surname>Aitya</surname><order>2</order></author><author><firstname>José</firstname><surname>Basilio</surname><order>3</order></author><author><firstname>Jan</firstname><surname>Baumbach</surname><order>4</order></author><author><firstname>Arriel</firstname><surname>Benis</surname><order>5</order></author><author><firstname>Chandan K.</firstname><surname>Behera</surname><order>6</order></author><author><firstname>Magda</firstname><surname>Bucholc</surname><order>7</order></author><author><firstname>Filippo</firstname><surname>Castiglione</surname><order>8</order></author><author><firstname>Ioanna</firstname><surname>Chouvarda</surname><order>9</order></author><author><firstname>Blandine</firstname><surname>Comte</surname><order>10</order></author><author><firstname>Tien-Tuan</firstname><surname>Dao</surname><order>11</order></author><author><firstname>Xuemei</firstname><surname>Ding</surname><order>12</order></author><author><firstname>Estelle</firstname><surname>Pujos-Guillot</surname><order>13</order></author><author><firstname>Nenad</firstname><surname>Filipovic</surname><order>14</order></author><author><firstname>David P.</firstname><surname>Finn</surname><order>15</order></author><author><firstname>David H.</firstname><surname>Glass</surname><order>16</order></author><author><firstname>Nissim</firstname><surname>Harel</surname><order>17</order></author><author><firstname>Tomas</firstname><surname>Iesmantas</surname><order>18</order></author><author><firstname>Ilinka</firstname><surname>Ivanoska</surname><order>19</order></author><author><firstname>Alok</firstname><surname>Joshi</surname><order>20</order></author><author><firstname>Karim Zouaoui</firstname><surname>Boudjeltia</surname><order>21</order></author><author><firstname>Badr</firstname><surname>Kaoui</surname><order>22</order></author><author><firstname>Daman</firstname><surname>Kaur</surname><order>23</order></author><author><firstname>Liam P.</firstname><surname>Maguire</surname><order>24</order></author><author><firstname>Paula L.</firstname><surname>McClean</surname><order>25</order></author><author><firstname>Niamh</firstname><surname>McCombe</surname><order>26</order></author><author><firstname>João Luís de</firstname><surname>Miranda</surname><order>27</order></author><author><firstname>Mihnea Alexandru</firstname><surname>Moisescu</surname><order>28</order></author><author><firstname>Francesco</firstname><surname>Pappalardo</surname><order>29</order></author><author><firstname>Annikka</firstname><surname>Polster</surname><order>30</order></author><author><firstname>Girijesh</firstname><surname>Prasad</surname><order>31</order></author><author><firstname>Damjana</firstname><surname>Rozman</surname><order>32</order></author><author><firstname>Ioan</firstname><surname>Sacala</surname><order>33</order></author><author><firstname>Jose M.</firstname><surname>Sanchez-Bornot</surname><order>34</order></author><author><firstname>Johannes A.</firstname><surname>Schmid</surname><order>35</order></author><author><firstname>Trevor</firstname><surname>Sharp</surname><order>36</order></author><author><firstname>Jordi</firstname><surname>Solé-Casals</surname><order>37</order></author><author><firstname>Vojtěch</firstname><surname>Spiwok</surname><order>38</order></author><author><firstname>George M.</firstname><surname>Spyrou</surname><order>39</order></author><author><firstname>Egils</firstname><surname>Stalidzans</surname><order>40</order></author><author><firstname>Blaž</firstname><surname>Stres</surname><order>41</order></author><author><firstname>Tijana</firstname><surname>Sustersic</surname><order>42</order></author><author><firstname>Ioannis</firstname><surname>Symeonidis</surname><order>43</order></author><author><firstname>Paolo</firstname><surname>Tieri</surname><order>44</order></author><author><firstname>Stephen</firstname><surname>Todd</surname><order>45</order></author><author><firstname>Kristel Van</firstname><surname>Steen</surname><order>46</order></author><author><firstname>Milena</firstname><surname>Veneva</surname><order>47</order></author><author><firstname>Da-Hui</firstname><surname>Wang</surname><order>48</order></author><author><firstname>Haiying</firstname><surname>Wang</surname><order>49</order></author><author><firstname>Hui</firstname><surname>Wang</surname><order>50</order></author><author><firstname>Steven</firstname><surname>Watterson</surname><order>51</order></author><author><firstname>KongFatt</firstname><surname>Wong-Lin</surname><order>52</order></author><author><firstname>Scott</firstname><surname>Yang</surname><orcid>0000-0002-6618-7483</orcid><order>53</order></author><author><firstname>Xin</firstname><surname>Zou</surname><order>54</order></author><author><firstname>Harald 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spelling	2021-12-30T14:04:08.6667459 v2 58942 2021-12-07 An Early Stage Researcher's Primer on Systems Medicine Terminology 81dc663ca0e68c60908d35b1d2ec3a9b 0000-0002-6618-7483 Scott Yang Scott Yang true false 2021-12-07 SCS Background: Systems Medicine is a novel approach to medicine, that is, an interdisciplinary field that considers the human body as a system, composed of multiple parts and of complex relationships at multiple levels, and further integrated into an environment. Exploring Systems Medicine implies understanding and combining concepts coming from diametral different fields, including medicine, biology, statistics, modeling and simulation, and data science. Such heterogeneity leads to semantic issues, which may slow down implementation and fruitful interaction between these highly diverse fields.Methods: In this review, we collect and explain more than100 terms related to Systems Medicine. These include both modeling and data science terms and basic systems medicine terms, along with some synthetic definitions, examples of applications, and lists of relevant references.Results: This glossary aims at being a first aid kit for the Systems Medicine researcher facing an unfamiliar term, where he/she can get a first understanding of them, and, more importantly, examples and references for digging into the topic. Journal Article Network and Systems Medicine 4 1 2 50 Mary Ann Liebert Inc 2690-5949 systems medicine; multiscale modeling; multiscale data science 1 2 2021 2021-02-01 10.1089/nsm.2020.0003 COLLEGE NANME Computer Science COLLEGE CODE SCS Swansea University 2021-12-30T14:04:08.6667459 2021-12-07T09:52:12.1164689 Faculty of Science and Engineering School of Mathematics and Computer Science - Computer Science Massimiliano Zanin 1 Nadim A.A. Aitya 2 José Basilio 3 Jan Baumbach 4 Arriel Benis 5 Chandan K. Behera 6 Magda Bucholc 7 Filippo Castiglione 8 Ioanna Chouvarda 9 Blandine Comte 10 Tien-Tuan Dao 11 Xuemei Ding 12 Estelle Pujos-Guillot 13 Nenad Filipovic 14 David P. Finn 15 David H. Glass 16 Nissim Harel 17 Tomas Iesmantas 18 Ilinka Ivanoska 19 Alok Joshi 20 Karim Zouaoui Boudjeltia 21 Badr Kaoui 22 Daman Kaur 23 Liam P. Maguire 24 Paula L. McClean 25 Niamh McCombe 26 João Luís de Miranda 27 Mihnea Alexandru Moisescu 28 Francesco Pappalardo 29 Annikka Polster 30 Girijesh Prasad 31 Damjana Rozman 32 Ioan Sacala 33 Jose M. Sanchez-Bornot 34 Johannes A. Schmid 35 Trevor Sharp 36 Jordi Solé-Casals 37 Vojtěch Spiwok 38 George M. Spyrou 39 Egils Stalidzans 40 Blaž Stres 41 Tijana Sustersic 42 Ioannis Symeonidis 43 Paolo Tieri 44 Stephen Todd 45 Kristel Van Steen 46 Milena Veneva 47 Da-Hui Wang 48 Haiying Wang 49 Hui Wang 50 Steven Watterson 51 KongFatt Wong-Lin 52 Scott Yang 0000-0002-6618-7483 53 Xin Zou 54 Harald H.H.W. Schmidt 55 58942__21968__b729cbacd0bb4ab7a88461d554b6242d.pdf 58942.pdf 2021-12-30T14:01:48.5209878 Output 3486033 application/pdf Version of Record true Copyright: Massimiliano Zanin et al., 2021. This Open Access article is distributed under the terms of the Creative Commons License true eng http://creativecommons.org/licenses/by/4.0),
title	An Early Stage Researcher's Primer on Systems Medicine Terminology
spellingShingle	An Early Stage Researcher's Primer on Systems Medicine Terminology Scott Yang
title_short	An Early Stage Researcher's Primer on Systems Medicine Terminology
title_full	An Early Stage Researcher's Primer on Systems Medicine Terminology
title_fullStr	An Early Stage Researcher's Primer on Systems Medicine Terminology
title_full_unstemmed	An Early Stage Researcher's Primer on Systems Medicine Terminology
title_sort	An Early Stage Researcher's Primer on Systems Medicine Terminology
author_id_str_mv	81dc663ca0e68c60908d35b1d2ec3a9b
author_id_fullname_str_mv	81dc663ca0e68c60908d35b1d2ec3a9b_***_Scott Yang
author	Scott Yang
author2	Massimiliano Zanin Nadim A.A. Aitya José Basilio Jan Baumbach Arriel Benis Chandan K. Behera Magda Bucholc Filippo Castiglione Ioanna Chouvarda Blandine Comte Tien-Tuan Dao Xuemei Ding Estelle Pujos-Guillot Nenad Filipovic David P. Finn David H. Glass Nissim Harel Tomas Iesmantas Ilinka Ivanoska Alok Joshi Karim Zouaoui Boudjeltia Badr Kaoui Daman Kaur Liam P. Maguire Paula L. McClean Niamh McCombe João Luís de Miranda Mihnea Alexandru Moisescu Francesco Pappalardo Annikka Polster Girijesh Prasad Damjana Rozman Ioan Sacala Jose M. Sanchez-Bornot Johannes A. Schmid Trevor Sharp Jordi Solé-Casals Vojtěch Spiwok George M. Spyrou Egils Stalidzans Blaž Stres Tijana Sustersic Ioannis Symeonidis Paolo Tieri Stephen Todd Kristel Van Steen Milena Veneva Da-Hui Wang Haiying Wang Hui Wang Steven Watterson KongFatt Wong-Lin Scott Yang Xin Zou Harald H.H.W. Schmidt
format	Journal article
container_title	Network and Systems Medicine
container_volume	4
container_issue	1
container_start_page	2
publishDate	2021
institution	Swansea University
issn	2690-5949
doi_str_mv	10.1089/nsm.2020.0003
publisher	Mary Ann Liebert Inc
college_str	Faculty of Science and Engineering
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hierarchy_top_id	facultyofscienceandengineering
hierarchy_top_title	Faculty of Science and Engineering
hierarchy_parent_id	facultyofscienceandengineering
hierarchy_parent_title	Faculty of Science and Engineering
department_str	School of Mathematics and Computer Science - Computer Science{{{_:::_}}}Faculty of Science and Engineering{{{_:::_}}}School of Mathematics and Computer Science - Computer Science
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description	Background: Systems Medicine is a novel approach to medicine, that is, an interdisciplinary field that considers the human body as a system, composed of multiple parts and of complex relationships at multiple levels, and further integrated into an environment. Exploring Systems Medicine implies understanding and combining concepts coming from diametral different fields, including medicine, biology, statistics, modeling and simulation, and data science. Such heterogeneity leads to semantic issues, which may slow down implementation and fruitful interaction between these highly diverse fields.Methods: In this review, we collect and explain more than100 terms related to Systems Medicine. These include both modeling and data science terms and basic systems medicine terms, along with some synthetic definitions, examples of applications, and lists of relevant references.Results: This glossary aims at being a first aid kit for the Systems Medicine researcher facing an unfamiliar term, where he/she can get a first understanding of them, and, more importantly, examples and references for digging into the topic.
published_date	2021-02-01T04:15:52Z
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score	11.012678

An Early Stage Researcher's Primer on Systems Medicine Terminology

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