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Microbiomes in the context of developing sustainable intensified aquaculture

Marlene Lorgen-Ritchie, Tamsyn Uren Webster Orcid Logo, Jamie McMurtrie, David Bass, Charles R. Tyler, Andrew Rowley, Samuel A. M. Martin

Frontiers in Microbiology, Volume: 14

Swansea University Authors: Tamsyn Uren Webster Orcid Logo, Andrew Rowley

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DOI (Published version): 10.3389/fmicb.2023.1200997

Abstract

With an ever-growing human population, the need for sustainable production of nutritional food sources has never been greater. Aquaculture is a key industry engaged in active development to increase production in line with this need while remaining sustainable in terms of environmental impact and pr...

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Published in: Frontiers in Microbiology
ISSN: 1664-302X
Published: Frontiers Media SA 2023
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URI: https://cronfa.swan.ac.uk/Record/cronfa63703
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spelling v2 63703 2023-06-26 Microbiomes in the context of developing sustainable intensified aquaculture 3ea91c154926c86f89ea6a761122ecf6 0000-0002-0072-9745 Tamsyn Uren Webster Tamsyn Uren Webster true false e98124f6e62b9592786899d7059e3a79 Andrew Rowley Andrew Rowley true false 2023-06-26 SBI With an ever-growing human population, the need for sustainable production of nutritional food sources has never been greater. Aquaculture is a key industry engaged in active development to increase production in line with this need while remaining sustainable in terms of environmental impact and promoting good welfare and health in farmed species. Microbiomes fundamentally underpin animal health, being a key part of their digestive, metabolic and defense systems, in the latter case protecting against opportunistic pathogens in the environment. The potential to manipulate the microbiome to the advantage of enhancing health, welfare and production is an intriguing prospect that has gained considerable traction in recent years. In this review we first set out what is known about the role of the microbiome in aquaculture production systems across the phylogenetic spectrum of cultured animals, from invertebrates to finfish. With a view to reducing environmental footprint and tightening biological and physical control, investment in “closed” aquaculture systems is on the rise, but little is known about how the microbial systems of these closed systems affect the health of cultured organisms. Through comparisons of the microbiomes and their dynamics across phylogenetically distinct animals and different aquaculture systems, we focus on microbial communities in terms of their functionality in order to identify what features within these microbiomes need to be harnessed for optimizing healthy intensified production in support of a sustainable future for aquaculture. Journal Article Frontiers in Microbiology 14 Frontiers Media SA 1664-302X functionality, health, immune system, microbiota, sustainability 23 6 2023 2023-06-23 10.3389/fmicb.2023.1200997 http://dx.doi.org/10.3389/fmicb.2023.1200997 COLLEGE NANME Biosciences COLLEGE CODE SBI Swansea University External research funder(s) paid the OA fee (includes OA grants disbursed by the Library) BBSRC/NERC BB/P017215/1 2023-07-12T15:55:59.2262856 2023-06-26T10:43:31.9474557 Faculty of Science and Engineering School of Biosciences, Geography and Physics - Biosciences Marlene Lorgen-Ritchie 1 Tamsyn Uren Webster 0000-0002-0072-9745 2 Jamie McMurtrie 3 David Bass 4 Charles R. Tyler 5 Andrew Rowley 6 Samuel A. M. Martin 7 63703__28073__4bc7345eb0ce47ceac4b255b13bcf2b6.pdf 63703.pdf 2023-07-10T15:43:58.2260092 Output 1354592 application/pdf Version of Record true Copyright © 2023 Lorgen-Ritchie, Uren Webster, McMurtrie, Bass, Tyler, Rowley and Martin. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. true eng http://creativecommons.org/licenses/by/4.0/
title Microbiomes in the context of developing sustainable intensified aquaculture
spellingShingle Microbiomes in the context of developing sustainable intensified aquaculture
Tamsyn Uren Webster
Andrew Rowley
title_short Microbiomes in the context of developing sustainable intensified aquaculture
title_full Microbiomes in the context of developing sustainable intensified aquaculture
title_fullStr Microbiomes in the context of developing sustainable intensified aquaculture
title_full_unstemmed Microbiomes in the context of developing sustainable intensified aquaculture
title_sort Microbiomes in the context of developing sustainable intensified aquaculture
author_id_str_mv 3ea91c154926c86f89ea6a761122ecf6
e98124f6e62b9592786899d7059e3a79
author_id_fullname_str_mv 3ea91c154926c86f89ea6a761122ecf6_***_Tamsyn Uren Webster
e98124f6e62b9592786899d7059e3a79_***_Andrew Rowley
author Tamsyn Uren Webster
Andrew Rowley
author2 Marlene Lorgen-Ritchie
Tamsyn Uren Webster
Jamie McMurtrie
David Bass
Charles R. Tyler
Andrew Rowley
Samuel A. M. Martin
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container_title Frontiers in Microbiology
container_volume 14
publishDate 2023
institution Swansea University
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doi_str_mv 10.3389/fmicb.2023.1200997
publisher Frontiers Media SA
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department_str School of Biosciences, Geography and Physics - Biosciences{{{_:::_}}}Faculty of Science and Engineering{{{_:::_}}}School of Biosciences, Geography and Physics - Biosciences
url http://dx.doi.org/10.3389/fmicb.2023.1200997
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description With an ever-growing human population, the need for sustainable production of nutritional food sources has never been greater. Aquaculture is a key industry engaged in active development to increase production in line with this need while remaining sustainable in terms of environmental impact and promoting good welfare and health in farmed species. Microbiomes fundamentally underpin animal health, being a key part of their digestive, metabolic and defense systems, in the latter case protecting against opportunistic pathogens in the environment. The potential to manipulate the microbiome to the advantage of enhancing health, welfare and production is an intriguing prospect that has gained considerable traction in recent years. In this review we first set out what is known about the role of the microbiome in aquaculture production systems across the phylogenetic spectrum of cultured animals, from invertebrates to finfish. With a view to reducing environmental footprint and tightening biological and physical control, investment in “closed” aquaculture systems is on the rise, but little is known about how the microbial systems of these closed systems affect the health of cultured organisms. Through comparisons of the microbiomes and their dynamics across phylogenetically distinct animals and different aquaculture systems, we focus on microbial communities in terms of their functionality in order to identify what features within these microbiomes need to be harnessed for optimizing healthy intensified production in support of a sustainable future for aquaculture.
published_date 2023-06-23T15:55:54Z
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