Journal article 434 views 20 downloads
The ocean sampling day consortium
GigaScience, Volume: 4, Issue: 1
Swansea University Author:
Eva C. Sonnenschein
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© 2015 Kopf et al. This is an Open Access article distributed under the terms of the Creative Commons Attribution License
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DOI (Published version): 10.1186/s13742-015-0066-5
Abstract
Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world’s oceans. It is a simultaneous global mega-sequencing campaign aiming to generate the...
Published in: | GigaScience |
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ISSN: | 2047-217X |
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Oxford University Press (OUP)
2015
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URI: | https://cronfa.swan.ac.uk/Record/cronfa61739 |
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<?xml version="1.0"?><rfc1807><datestamp>2022-11-04T13:49:13.3849630</datestamp><bib-version>v2</bib-version><id>61739</id><entry>2022-10-31</entry><title>The ocean sampling day consortium</title><swanseaauthors><author><sid>f6a4027578a15ea3e6453a54b849c686</sid><ORCID>0000-0001-6959-5100</ORCID><firstname>Eva C.</firstname><surname>Sonnenschein</surname><name>Eva C. Sonnenschein</name><active>true</active><ethesisStudent>false</ethesisStudent></author></swanseaauthors><date>2022-10-31</date><deptcode>SBI</deptcode><abstract>Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world’s oceans. It is a simultaneous global mega-sequencing campaign aiming to generate the largest standardized microbial data set in a single day. 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This commentary outlines the establishment, function and aims of the Consortium and describes our vision for a sustainable study of marine microbial communities and their embedded functional traits.</abstract><type>Journal Article</type><journal>GigaScience</journal><volume>4</volume><journalNumber>1</journalNumber><paginationStart/><paginationEnd/><publisher>Oxford University Press (OUP)</publisher><placeOfPublication/><isbnPrint/><isbnElectronic/><issnPrint/><issnElectronic>2047-217X</issnElectronic><keywords/><publishedDay>1</publishedDay><publishedMonth>12</publishedMonth><publishedYear>2015</publishedYear><publishedDate>2015-12-01</publishedDate><doi>10.1186/s13742-015-0066-5</doi><url/><notes/><college>COLLEGE NANME</college><department>Biosciences</department><CollegeCode>COLLEGE CODE</CollegeCode><DepartmentCode>SBI</DepartmentCode><institution>Swansea 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Biosciences</level></path><authors><author><firstname>Anna</firstname><surname>Kopf</surname><order>1</order></author><author><firstname>Mesude</firstname><surname>Bicak</surname><order>2</order></author><author><firstname>Renzo</firstname><surname>Kottmann</surname><order>3</order></author><author><firstname>Julia</firstname><surname>Schnetzer</surname><order>4</order></author><author><firstname>Ivaylo</firstname><surname>Kostadinov</surname><order>5</order></author><author><firstname>Katja</firstname><surname>Lehmann</surname><order>6</order></author><author><firstname>Antonio</firstname><surname>Fernandez-Guerra</surname><order>7</order></author><author><firstname>Christian</firstname><surname>Jeanthon</surname><order>8</order></author><author><firstname>Eyal</firstname><surname>Rahav</surname><order>9</order></author><author><firstname>Matthias</firstname><surname>Ullrich</surname><order>10</order></author><author><firstname>Antje</firstname><surname>Wichels</surname><order>11</order></author><author><firstname>Gunnar</firstname><surname>Gerdts</surname><order>12</order></author><author><firstname>Paraskevi</firstname><surname>Polymenakou</surname><order>13</order></author><author><firstname>Giorgos</firstname><surname>Kotoulas</surname><order>14</order></author><author><firstname>Rania</firstname><surname>Siam</surname><order>15</order></author><author><firstname>Rehab 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2022-11-04T13:49:13.3849630 v2 61739 2022-10-31 The ocean sampling day consortium f6a4027578a15ea3e6453a54b849c686 0000-0001-6959-5100 Eva C. Sonnenschein Eva C. Sonnenschein true false 2022-10-31 SBI Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world’s oceans. It is a simultaneous global mega-sequencing campaign aiming to generate the largest standardized microbial data set in a single day. This will be achievable only through the coordinated efforts of an Ocean Sampling Day Consortium, supportive partnerships and networks between sites. This commentary outlines the establishment, function and aims of the Consortium and describes our vision for a sustainable study of marine microbial communities and their embedded functional traits. Journal Article GigaScience 4 1 Oxford University Press (OUP) 2047-217X 1 12 2015 2015-12-01 10.1186/s13742-015-0066-5 COLLEGE NANME Biosciences COLLEGE CODE SBI Swansea University 2022-11-04T13:49:13.3849630 2022-10-31T15:23:15.8056371 Faculty of Science and Engineering School of Biosciences, Geography and Physics - Biosciences Anna Kopf 1 Mesude Bicak 2 Renzo Kottmann 3 Julia Schnetzer 4 Ivaylo Kostadinov 5 Katja Lehmann 6 Antonio Fernandez-Guerra 7 Christian Jeanthon 8 Eyal Rahav 9 Matthias Ullrich 10 Antje Wichels 11 Gunnar Gerdts 12 Paraskevi Polymenakou 13 Giorgos Kotoulas 14 Rania Siam 15 Rehab Z Abdallah 16 Eva C Sonnenschein 17 Thierry Cariou 18 Fergal O’Gara 19 Stephen Jackson 20 Sandi Orlic 21 Michael Steinke 22 Julia Busch 23 Bernardo Duarte 24 Isabel Caçador 25 João Canning-Clode 26 Oleksandra Bobrova 27 Viggo Marteinsson 28 Eyjolfur Reynisson 29 Clara Magalhães Loureiro 30 Gian Marco Luna 31 Grazia Marina Quero 32 Carolin R Löscher 33 Anke Kremp 34 Marie E DeLorenzo 35 Lise Øvreås 36 Jennifer Tolman 37 Julie LaRoche 38 Antonella Penna 39 Marc Frischer 40 Timothy Davis 41 Barker Katherine 42 Christopher P Meyer 43 Sandra Ramos 44 Catarina Magalhães 45 Florence Jude-Lemeilleur 46 Ma Leopoldina Aguirre-Macedo 47 Shiao Wang 48 Nicole Poulton 49 Scott Jones 50 Rachel Collin 51 Jed A Fuhrman 52 Pascal Conan 53 Cecilia Alonso 54 Noga Stambler 55 Kelly Goodwin 56 Michael M Yakimov 57 Federico Baltar 58 Levente Bodrossy 59 Jodie Van De Kamp 60 Dion MF Frampton 61 Martin Ostrowski 62 Paul Van Ruth 63 Paul Malthouse 64 Simon Claus 65 Klaas Deneudt 66 Jonas Mortelmans 67 Sophie Pitois 68 David Wallom 69 Ian Salter 70 Rodrigo Costa 71 Declan C Schroeder 72 Mahrous M Kandil 73 Valentina Amaral 74 Florencia Biancalana 75 Rafael Santana 76 Maria Luiza Pedrotti 77 Takashi Yoshida 78 Hiroyuki Ogata 79 Tim Ingleton 80 Kate Munnik 81 Naiara Rodriguez-Ezpeleta 82 Veronique Berteaux-Lecellier 83 Patricia Wecker 84 Ibon Cancio 85 Daniel Vaulot 86 Christina Bienhold 87 Hassan Ghazal 88 Bouchra Chaouni 89 Soumya Essayeh 90 Sara Ettamimi 91 El Houcine Zaid 92 Noureddine Boukhatem 93 Abderrahim Bouali 94 Rajaa Chahboune 95 Said Barrijal 96 Mohammed Timinouni 97 Fatima El Otmani 98 Mohamed Bennani 99 Marianna Mea 100 Nadezhda Todorova 101 Ventzislav Karamfilov 102 Petra ten Hoopen 103 Guy Cochrane 104 Stephane L’Haridon 105 Kemal Can Bizsel 106 Alessandro Vezzi 107 Federico M Lauro 108 Patrick Martin 109 Rachelle M Jensen 110 Jamie Hinks 111 Susan Gebbels 112 Riccardo Rosselli 113 Fabio De Pascale 114 Riccardo Schiavon 115 Antonina dos Santos 116 Emilie Villar 117 Stéphane Pesant 118 Bruno Cataletto 119 Francesca Malfatti 120 Ranjith Edirisinghe 121 Jorge A Herrera Silveira 122 Michele Barbier 123 Valentina Turk 124 Tinkara Tinta 125 Wayne J Fuller 126 Ilkay Salihoglu 127 Nedime Serakinci 128 Mahmut Cerkez Ergoren 129 Eileen Bresnan 130 Juan Iriberri 131 Paul Anders Fronth Nyhus 132 Edvardsen Bente 133 Hans Erik Karlsen 134 Peter N Golyshin 135 Josep M Gasol 136 Snejana Moncheva 137 Nina Dzhembekova 138 Zackary Johnson 139 Christopher David Sinigalliano 140 Maribeth Louise Gidley 141 Adriana Zingone 142 Roberto Danovaro 143 George Tsiamis 144 Melody S Clark 145 Ana Cristina Costa 146 Monia El Bour 147 Ana M Martins 148 R Eric Collins 149 Anne-Lise Ducluzeau 150 Jonathan Martinez 151 Mark J Costello 152 Linda A Amaral-Zettler 153 Jack A Gilbert 154 Neil Davies 155 Dawn Field 156 Frank Oliver Glöckner 157 Eva C. Sonnenschein 0000-0001-6959-5100 158 61739__25651__4fcc25514b5a4e3386a9d7896f6b7b5f.pdf 61739.pdf 2022-11-04T13:48:33.0106399 Output 433422 application/pdf Version of Record true © 2015 Kopf et al. This is an Open Access article distributed under the terms of the Creative Commons Attribution License true eng http://creativecommons.org/licenses/by/4.0 |
title |
The ocean sampling day consortium |
spellingShingle |
The ocean sampling day consortium Eva C. Sonnenschein |
title_short |
The ocean sampling day consortium |
title_full |
The ocean sampling day consortium |
title_fullStr |
The ocean sampling day consortium |
title_full_unstemmed |
The ocean sampling day consortium |
title_sort |
The ocean sampling day consortium |
author_id_str_mv |
f6a4027578a15ea3e6453a54b849c686 |
author_id_fullname_str_mv |
f6a4027578a15ea3e6453a54b849c686_***_Eva C. Sonnenschein |
author |
Eva C. Sonnenschein |
author2 |
Anna Kopf Mesude Bicak Renzo Kottmann Julia Schnetzer Ivaylo Kostadinov Katja Lehmann Antonio Fernandez-Guerra Christian Jeanthon Eyal Rahav Matthias Ullrich Antje Wichels Gunnar Gerdts Paraskevi Polymenakou Giorgos Kotoulas Rania Siam Rehab Z Abdallah Eva C Sonnenschein Thierry Cariou Fergal O’Gara Stephen Jackson Sandi Orlic Michael Steinke Julia Busch Bernardo Duarte Isabel Caçador João Canning-Clode Oleksandra Bobrova Viggo Marteinsson Eyjolfur Reynisson Clara Magalhães Loureiro Gian Marco Luna Grazia Marina Quero Carolin R Löscher Anke Kremp Marie E DeLorenzo Lise Øvreås Jennifer Tolman Julie LaRoche Antonella Penna Marc Frischer Timothy Davis Barker Katherine Christopher P Meyer Sandra Ramos Catarina Magalhães Florence Jude-Lemeilleur Ma Leopoldina Aguirre-Macedo Shiao Wang Nicole Poulton Scott Jones Rachel Collin Jed A Fuhrman Pascal Conan Cecilia Alonso Noga Stambler Kelly Goodwin Michael M Yakimov Federico Baltar Levente Bodrossy Jodie Van De Kamp Dion MF Frampton Martin Ostrowski Paul Van Ruth Paul Malthouse Simon Claus Klaas Deneudt Jonas Mortelmans Sophie Pitois David Wallom Ian Salter Rodrigo Costa Declan C Schroeder Mahrous M Kandil Valentina Amaral Florencia Biancalana Rafael Santana Maria Luiza Pedrotti Takashi Yoshida Hiroyuki Ogata Tim Ingleton Kate Munnik Naiara Rodriguez-Ezpeleta Veronique Berteaux-Lecellier Patricia Wecker Ibon Cancio Daniel Vaulot Christina Bienhold Hassan Ghazal Bouchra Chaouni Soumya Essayeh Sara Ettamimi El Houcine Zaid Noureddine Boukhatem Abderrahim Bouali Rajaa Chahboune Said Barrijal Mohammed Timinouni Fatima El Otmani Mohamed Bennani Marianna Mea Nadezhda Todorova Ventzislav Karamfilov Petra ten Hoopen Guy Cochrane Stephane L’Haridon Kemal Can Bizsel Alessandro Vezzi Federico M Lauro Patrick Martin Rachelle M Jensen Jamie Hinks Susan Gebbels Riccardo Rosselli Fabio De Pascale Riccardo Schiavon Antonina dos Santos Emilie Villar Stéphane Pesant Bruno Cataletto Francesca Malfatti Ranjith Edirisinghe Jorge A Herrera Silveira Michele Barbier Valentina Turk Tinkara Tinta Wayne J Fuller Ilkay Salihoglu Nedime Serakinci Mahmut Cerkez Ergoren Eileen Bresnan Juan Iriberri Paul Anders Fronth Nyhus Edvardsen Bente Hans Erik Karlsen Peter N Golyshin Josep M Gasol Snejana Moncheva Nina Dzhembekova Zackary Johnson Christopher David Sinigalliano Maribeth Louise Gidley Adriana Zingone Roberto Danovaro George Tsiamis Melody S Clark Ana Cristina Costa Monia El Bour Ana M Martins R Eric Collins Anne-Lise Ducluzeau Jonathan Martinez Mark J Costello Linda A Amaral-Zettler Jack A Gilbert Neil Davies Dawn Field Frank Oliver Glöckner Eva C. Sonnenschein |
format |
Journal article |
container_title |
GigaScience |
container_volume |
4 |
container_issue |
1 |
publishDate |
2015 |
institution |
Swansea University |
issn |
2047-217X |
doi_str_mv |
10.1186/s13742-015-0066-5 |
publisher |
Oxford University Press (OUP) |
college_str |
Faculty of Science and Engineering |
hierarchytype |
|
hierarchy_top_id |
facultyofscienceandengineering |
hierarchy_top_title |
Faculty of Science and Engineering |
hierarchy_parent_id |
facultyofscienceandengineering |
hierarchy_parent_title |
Faculty of Science and Engineering |
department_str |
School of Biosciences, Geography and Physics - Biosciences{{{_:::_}}}Faculty of Science and Engineering{{{_:::_}}}School of Biosciences, Geography and Physics - Biosciences |
document_store_str |
1 |
active_str |
0 |
description |
Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world’s oceans. It is a simultaneous global mega-sequencing campaign aiming to generate the largest standardized microbial data set in a single day. This will be achievable only through the coordinated efforts of an Ocean Sampling Day Consortium, supportive partnerships and networks between sites. This commentary outlines the establishment, function and aims of the Consortium and describes our vision for a sustainable study of marine microbial communities and their embedded functional traits. |
published_date |
2015-12-01T04:20:47Z |
_version_ |
1763754374743457792 |
score |
11.016235 |